Basic information
Official Symbol RBMX
DescriptionRNA binding motif protein, X-linked
Other AliasesRP11-1114A5.1, HNRPG, RBMXP1, RBMXRT, RNMX, hnRNP-G
Other DescriptionRNA binding motif protein, X chromosome; RNA-binding motif protein, X chromosome; glycoprotein p43; heterogeneous nuclear ribonucleoprotein G; hnRNP G
Mutation typepremature termination 338:G->TAG, premature termination 381:R->TGA
LocationScaffold000706_1:5063668 5067568 +

  ±  bp flank
WikiWikipedia GeneCard
Sequence
RBMX 
ATGGTTGAAGCAGATCGCCCAGGAAAGCTCTTCATTGGTGGGCTTAATAC
AGAAACCAATGAGAAAGCCCTTGAAGCTGTATTTGGCAAATATGGACGAA
TAGTGGAAGTACTCTTGATGAAAGACCGTGAAACCAACAAATCAAGAGGT
TTTGCTTTTGTCACCTTTGAAAGTCCAGCAGATGCAAAGGATGCAGCCAG
AGACATGAATGGAAAGTCTCTAGATGGAAAAGCCATCAAGGTGGAACAAG
CCACTAAACCATCATTTGAAAGTGGTAGACATGGACCACCTCCACCTCCA
AGAAGCAGAGGCCCTCCCAGAGGCCTTAGAGGAGGGCGAGGAGGAAGTGG
AGGAACCAGGGGACCTCCTTCCCGTGGAGGGCACATGGATGATGGTGGCT
ATTCCATGAATTTTAACATGAGTTCTTCCAGGGGACCACTTCCAGTAAAA
AGAGGGCCACCACCACGAAGTGGGGGTCCTCCTCCTAAAAGATCAGCCCC
ATCAGGACCAGTTCGCAGCAGCAGTGGAATGGGAGGAAGAGCCCCTGTAT
CACGTGGAAGAGATAGTTATGGAGGCCCACCTCGAAGGGAGCCCTTGCCC
TCTCGTAGAGATGTTTATTTGTCCCCAAGAGATGATGGATATTCTACAAA
AGACAGCTATTCAAGCAGAGATTACCCAAGTTCTCGTGATACAAGAGATT
ATGCACCACCACCAAGAGATTATACTTACCGTGATTATGGTCATTCCAGT
TCACGTGATGACTATCCATCAAGAGGCTATAGTGACAGAGATGGTTATGG
TCGTGATCGTGATTATTCAGATCATCCAAGTGGAGGTTCCTACAGAGATT
CATATGAGAGTTATGGTAACTCACGTAGTGCTCCACCTACACGAGGGCCC
CCGCCATCTTATGGTGGAAGCAGTCGCTATGATGATTACAGCAGCTCACG
TGACGGATATGGTGGAAGTCGAGACAGTTACTCAAGCAGCCAAAGTGATC
TCTACTCCAGTTAGTGTGATCGGGTTGGCAGACAAGAAAGAGGGCTTCCC
CCATCTATGGAAAGGGGGTGCCCTCCTCCACGTGATTCCTACAGCAGTTC
AAGCCACAGGGCACCAAGAGGTGGTAGCCATGGAGGAAGCTGATCTGATA
GAGGGGGAGGTAGAAACAGATAT
Alignment
Align speciePep lengthPep align beginPep align endMutaion type and postion
Human3911391Premature termination 338:G->TAG, Premature termination 381:R->TGA
 Instructions:
 *** -> premature termination codon;  # -> frame shift 

 Alignment:
 Human     pep sequence --->
 ||||||||||||||||||||||
 Treeshrew pep sequence --->
 Treeshrew cds sequence --->
  
MetValGluAlaAspArgProGlyLysLeuPheIleGlyGlyLeuAsnThrGluThrAsnGl
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
MetValGluAlaAspArgProGlyLysLeuPheIleGlyGlyLeuAsnThrGluThrAsnGl
ATGGTTGAAGCAGATCGCCCAGGAAAGCTCTTCATTGGTGGGCTTAATACAGAAACCAATGA

uLysAlaLeuGluAlaValPheGlyLysTyrGlyArgIleValGlu{V}  >>>> Target
||||||||||||||||||||||||||||||||||||||||||||||{|}            1
uLysAlaLeuGluAlaValPheGlyLysTyrGlyArgIleValGlu{V}++           
GAAAGCCCTTGAAGCTGTATTTGGCAAATATGGACGAATAGTGGAA{G}gt           

 Intron 1 >>>>  {al}LeuLeuMetLysAspArgGluThrAsnLysSerArgGlyPhe
99 bp           {||}||||||||||||||||||||||||||||||||||||||||||
              ++{al}LeuLeuMetLysAspArgGluThrAsnLysSerArgGlyPhe
              ag{TA}CTCTTGATGAAAGACCGTGAAACCAACAAATCAAGAGGTTTT

AlaPheValThrPheGluSerProAlaAspAlaLysAspAlaAlaArgAspMetAsnGlyLy
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
AlaPheValThrPheGluSerProAlaAspAlaLysAspAlaAlaArgAspMetAsnGlyLy
GCTTTTGTCACCTTTGAAAGTCCAGCAGATGCAAAGGATGCAGCCAGAGACATGAATGGAAA

s  >>>> Target Intron 2 >>>>  SerLeuAspGlyLysAlaIleLysValGluGl
|            718 bp           ||||||||||||||||||||||||||||||||
s++                         ++SerLeuAspGlyLysAlaIleLysValGluGl
Ggt                         agTCTCTAGATGGAAAAGCCATCAAGGTGGAACA

nAlaThrLysProSerPheGluSerGlyArgArgGlyProProProProProArgSerArgG
|||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||
nAlaThrLysProSerPheGluSerGlyArgHisGlyProProProProProArgSerArgG
AGCCACTAAACCATCATTTGAAAGTGGTAGACATGGACCACCTCCACCTCCAAGAAGCAGAG

lyProProArgGlyLeuArgGlyGlyArgGlyGlySerGlyGlyThrArgGlyProProSer
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
lyProProArgGlyLeuArgGlyGlyArgGlyGlySerGlyGlyThrArgGlyProProSer
GCCCTCCCAGAGGCCTTAGAGGAGGGCGAGGAGGAAGTGGAGGAACCAGGGGACCTCCTTCC

ArgGlyGlyHisMet{A}  >>>> Target Intron 3 >>>>  {sp}AspGlyGlyTy
|||||||||||||||{|}            736 bp           {||}|||||||||||
ArgGlyGlyHisMet{A}++                         ++{sp}AspGlyGlyTy
CGTGGAGGGCACATG{G}gt                         ag{AT}GATGGTGGCTA

rSerMetAsnPheAsnMetSerSerSerArgGlyProLeuProValLysArgGlyProProP
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
rSerMetAsnPheAsnMetSerSerSerArgGlyProLeuProValLysArgGlyProProP
TTCCATGAATTTTAACATGAGTTCTTCCAGGGGACCACTTCCAGTAAAAAGAGGGCCACCAC

roArgSerGlyGlyProProProLysArgSerAlaProSerGlyProValArgSerSerSer
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
roArgSerGlyGlyProProProLysArgSerAlaProSerGlyProValArgSerSerSer
CACGAAGTGGGGGTCCTCCTCCTAAAAGATCAGCCCCATCAGGACCAGTTCGCAGCAGCAGT

GlyMetGlyGlyArg{A}  >>>> Target Intron 4 >>>>  {la}ProValSerAr
|||||||||||||||{|}            271 bp           {||}|||||||||||
GlyMetGlyGlyArg{A}++                         ++{la}ProValSerAr
GGAATGGGAGGAAGA{G}gt                         ag{CC}CCTGTATCACG

gGlyArgAspSerTyrGlyGlyProProArgArgGluProLeuProSerArgArgAspValT
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
gGlyArgAspSerTyrGlyGlyProProArgArgGluProLeuProSerArgArgAspValT
TGGAAGAGATAGTTATGGAGGCCCACCTCGAAGGGAGCCCTTGCCCTCTCGTAGAGATGTTT

yrLeuSerProArgAspAspGlyTyrSerThrLysAsp{Se}  >>>> Target Intron
||||||||||||||||||||||||||||||||||||||{||}            88 bp   
yrLeuSerProArgAspAspGlyTyrSerThrLysAsp{Se}++                  
ATTTGTCCCCAAGAGATGATGGATATTCTACAAAAGAC{AG}gt                  

 5 >>>>  {r}TyrSerSerArgAspTyrProSerSerArgAspThrArgAspTyrAlaPr
         {|}||||||||||||||||||||||||||||||||||||||||||||||||||
       ++{r}TyrSerSerArgAspTyrProSerSerArgAspThrArgAspTyrAlaPr
       ag{C}TATTCAAGCAGAGATTACCCAAGTTCTCGTGATACAAGAGATTATGCACC

oProProArgAspTyrThrTyrArgAspTyrGlyHisSerSerSerArgAspAspTyrProS
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
oProProArgAspTyrThrTyrArgAspTyrGlyHisSerSerSerArgAspAspTyrProS
ACCACCAAGAGATTATACTTACCGTGATTATGGTCATTCCAGTTCACGTGATGACTATCCAT

erArgGlyTyr{Se}  >>>> Target Intron 6 >>>>  {r}AspArgAspGlyTyr
|||||||||||{||}            91 bp            {|}|||||||||||||||
erArgGlyTyr{Se}++                         ++{r}AspArgAspGlyTyr
CAAGAGGCTAT{AG}gt                         ag{T}GACAGAGATGGTTAT

GlyArgAspArgAspTyrSerAspHisProSerGlyGlySerTyrArgAspSerTyrGluSe
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GlyArgAspArgAspTyrSerAspHisProSerGlyGlySerTyrArgAspSerTyrGluSe
GGTCGTGATCGTGATTATTCAGATCATCCAAGTGGAGGTTCCTACAGAGATTCATATGAGAG

rTyr{G}  >>>> Target Intron 7 >>>>  {ly}AsnSerArgSerAlaProProT
||||{|}            625 bp           {||}||||||||||||||||||||||
rTyr{G}++                         ++{ly}AsnSerArgSerAlaProProT
TTAT{G}gt                         ag{GT}AACTCACGTAGTGCTCCACCTA

hrArgGlyProProProSerTyrGlyGlySerSerArgTyrAspAspTyrSerSerSerArg
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
hrArgGlyProProProSerTyrGlyGlySerSerArgTyrAspAspTyrSerSerSerArg
CACGAGGGCCCCCGCCATCTTATGGTGGAAGCAGTCGCTATGATGATTACAGCAGCTCACGT

AspGlyTyrGlyGlySerArgAspSerTyrSerSerSerArgSerAspLeuTyrSerSerGl
|||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||  
AspGlyTyrGlyGlySerArgAspSerTyrSerSerSerGlnSerAspLeuTyrSerSer**
GACGGATATGGTGGAAGTCGAGACAGTTACTCAAGCAGCCAAAGTGATCTCTACTCCAGTTA

yArgAspArgValGlyArgGlnGluArgGlyLeuProProSerMetGluArgGlyTyrProP
    |||||||||||||||||||||||||||||||||||||||||||||||||||   ||||
*CysAspArgValGlyArgGlnGluArgGlyLeuProProSerMetGluArgGlyCysProP
GTGTGATCGGGTTGGCAGACAAGAAAGAGGGCTTCCCCCATCTATGGAAAGGGGGTGCCCTC

roProArgAspSerTyrSerSerSerSerArgGlyAlaProArgGlyGlyGlyArgGlyGly
|||||||||||||||||||||||||||||      |||||||||||||||      ||||||
roProArgAspSerTyrSerSerSerSerHisArgAlaProArgGlyGlySerHisGlyGly
CTCCACGTGATTCCTACAGCAGTTCAAGCCACAGGGCACCAAGAGGTGGTAGCCATGGAGGA

SerArgSerAspArgGlyGlyGlyArgSerArgTyr
|||   |||||||||||||||||||||   ||||||
Ser***SerAspArgGlyGlyGlyArgAsnArgTyr
AGCTGATCTGATAGAGGGGGAGGTAGAAACAGATAT


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