| Basic information |
| Official Symbol | PGAM4 |
| Description | phosphoglycerate mutase family member 4 |
| Other Aliases | PGAM-B, PGAM1, PGAM3, dJ1000K24.1 |
| Other Description | phosphoglycerate mutase 4; phosphoglycerate mutase family 3; phosphoglycerate mutase processed protein; probable phosphoglycerate mutase 4 |
| Mutation type | Insert and frame-shift 156-157:P-K^G, Insert and frame-shift 190-191:L-Q^G |
| Location | Scaffold000542_1:3753703 3754454 + |
| Wiki | Wikipedia GeneCard |
| Sequence |
| PGAM4 |
TACAAGCTGGTGCTCATCAGGCACGGCGAGAGCGCCTGGAACCTGGAGAA CAGCTTCAGCAGCTGGTTCGACGCTGACTTGAGCCCTGCGGGCCATGAGG AGGCGAAGCGCGGCGGGCAGGCGCTGCGAGATGCCGGCTACGAATTTGAC ATCTGCTTCACCTCAGTGCAGAAGAGGGCGATCCGGACCCTCTGGAGAGT GCTGGATGCCATTGTCCAGATGTGGCTGCGGGTGGTGAGGACATGGCGCC TCAATGAGCGGCGCTACGGGGCCCTCACAGGCCTCAACAAGGCAGAAGCT GCGGCCAAGCACGGGGAGGCGCAGGTGAAGATCTGGAGGCGTTCCTACGA CGTCCCGCCGCCCCCAATGGAGCCCGACCACCCCTTCTACAGCAACATCA GTAAGGATCGCAGGTATGCAGATCTCACTGAAGACCAGCCGCCCTCCTGT GAGTCTAAGGACACGATTGCCAGAGCTCTGCCCTTCTGGAATGAGGAAGT CGTTCCCCAGATCAAGGAGGGGAAACGCATACTGATTGCAGCCCATGGCA ACAGCCTGCGGGGCATCGTCAAGCACCTGGAGGGTCTCTCTGAAGAGGCT ATCATGGAGCTGAGCCTGCCTACCGGTATCCCCATTGTCTATGAGTTGGA CAAGAACTTGAAGCCCATCAAGCCCAGGCCATTCCTGGGGGATGAAGAGA CCGTACATAAAGCCATGGAAGCTGTGGCTGCCCAGGGCAAGGCCAAGAAG |
| Alignment |
| Align specie | Pep length | Pep align begin | Pep align end | Mutaion type and postion |
| Human | 254 | 4 | 254 | Insert and frame-shift 156-157:P-K^G, Insert and frame-shift 190-191:L-Q^G |
Instructions:
*** -> premature termination codon; # -> frame shift
Alignment:
Human pep sequence --->
||||||||||||||||||||||
Treeshrew pep sequence --->
Treeshrew cds sequence --->
TyrLysLeuValLeuIleArgHisGlyGluSerThrTrpAsnLeuGluAsnArgPheSerCy
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||
TyrLysLeuValLeuIleArgHisGlyGluSerAlaTrpAsnLeuGluAsnSerPheSerSe
TACAAGCTGGTGCTCATCAGGCACGGCGAGAGCGCCTGGAACCTGGAGAACAGCTTCAGCAG
sTrpTyrAspAlaAspLeuSerProAlaGlyHisGluGluAlaLysArgGlyGlyGlnAlaL
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
rTrpPheAspAlaAspLeuSerProAlaGlyHisGluGluAlaLysArgGlyGlyGlnAlaL
CTGGTTCGACGCTGACTTGAGCCCTGCGGGCCATGAGGAGGCGAAGCGCGGCGGGCAGGCGC
euArgAspAlaGlyTyrGluPheAspIleCysLeuThrSerValGlnLysArgValIleArg
|||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||
euArgAspAlaGlyTyrGluPheAspIleCysPheThrSerValGlnLysArgAlaIleArg
TGCGAGATGCCGGCTACGAATTTGACATCTGCTTCACCTCAGTGCAGAAGAGGGCGATCCGG
ThrLeuTrpThrValLeuAspAlaIleAspGlnMetTrpLeuProValValArgThrTrpAr
||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||
ThrLeuTrpArgValLeuAspAlaIleValGlnMetTrpLeuArgValValArgThrTrpAr
ACCCTCTGGAGAGTGCTGGATGCCATTGTCCAGATGTGGCTGCGGGTGGTGAGGACATGGCG
gLeuAsnGluArgHisTyrGlyGlyLeuThrGlyLeuAsnLysAlaGluThrAlaAlaLysH
||||||||||||| |||||| |||||||||||||||||||||||| ||||||||||
gLeuAsnGluArgArgTyrGlyAlaLeuThrGlyLeuAsnLysAlaGluAlaAlaAlaLysH
CCTCAATGAGCGGCGCTACGGGGCCCTCACAGGCCTCAACAAGGCAGAAGCTGCGGCCAAGC
isGlyGluAlaGlnValLysIleTrpArgArgSerTyrAspValProProProProMetGlu
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
isGlyGluAlaGlnValLysIleTrpArgArgSerTyrAspValProProProProMetGlu
ACGGGGAGGCGCAGGTGAAGATCTGGAGGCGTTCCTACGACGTCCCGCCGCCCCCAATGGAG
ProAspHisProPheTyrSerAsnIleSerLysAspArgArgTyrAlaAspLeuThrGluAs
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
ProAspHisProPheTyrSerAsnIleSerLysAspArgArgTyrAlaAspLeuThrGluAs
CCCGACCACCCCTTCTACAGCAACATCAGTAAGGATCGCAGGTATGCAGATCTCACTGAAGA
pGlnLeuProSerTyrGluSerPro-LysAspThrIleAlaArgAlaLeuProPheTrpAsn
|||| |||||| |||||| #||||||||||||||||||||||||||||||||||||
pGlnProProSerCysGluSer---#LysAspThrIleAlaArgAlaLeuProPheTrpAsn
CCAGCCGCCCTCCTGTGAGTCT---GAAGGACACGATTGCCAGAGCTCTGCCCTTCTGGAAT
GluGluIleValProGlnIleLysGluGlyLysArgValLeuIleAlaAlaHisGlyAsnSe
|||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
GluGluValValProGlnIleLysGluGlyLysArgIleLeuIleAlaAlaHisGlyAsnSe
GAGGAAGTCGTTCCCCAGATCAAGGAGGGGAAACGCATACTGATTGCAGCCCATGGCAACAG
rLeu-GlnGlyIleAlaLysHisValGluGlyLeuSerGluGluAlaIleMetGluLeuAsn
||||# |||||| |||||| |||||||||||||||||||||||||||||||||
rLeu#ArgGlyIleValLysHisLeuGluGlyLeuSerGluGluAlaIleMetGluLeuSer
CCTGGCGGGGCATCGTCAAGCACCTGGAGGGTCTCTCTGAAGAGGCTATCATGGAGCTGAGC
LeuProThrGlyIleProIleValTyrGluLeuAspLysAsnLeuLysProIleLysProMe
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
LeuProThrGlyIleProIleValTyrGluLeuAspLysAsnLeuLysProIleLysProAr
CTGCCTACCGGTATCCCCATTGTCTATGAGTTGGACAAGAACTTGAAGCCCATCAAGCCCAG
tGlnPheLeuGlyAspGluGluThrValCysLysAlaIleGluAlaValAlaAlaGlnGlyL
|||||||||||||||||||||||| |||||| ||||||||||||||||||||||
gProPheLeuGlyAspGluGluThrValHisLysAlaMetGluAlaValAlaAlaGlnGlyL
GCCATTCCTGGGGGATGAAGAGACCGTACATAAAGCCATGGAAGCTGTGGCTGCCCAGGGCA
ysAlaLysLys
|||||||||||
ysAlaLysLys
AGGCCAAGAAG
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