| Basic information |
| Official Symbol | NCALD |
| Description | neurocalcin delta |
| Other Aliases | NA |
| Other Description | neurocalcin-delta |
| Mutation type | Insert and frame-shift 177-178:C-A^AT |
| Location | Scaffold141538_1:399717 427791 + |
| Wiki | Wikipedia GeneCard |
| Sequence |
| NCALD |
ATGGGGAAACAGAACAGCAAGCTGCGCCCAGAGGTCATGCAGGACTTGCT GGAAAGTACAGACTTTACAGAGCATGAGATCCAGGAGTGGTATAAAGGCT TCTTGAGAGACTGCCCCAGTGGACATTTGTCAATGGAAGAATTTAAGAAA ATATATGGGAACTTTTTCCCTTATGGGGATGCTTCCAAATTCGCAGAGCA TGTCTTCCGCACCTTTGATGCAAACGGAGATGGGACAATAGACTTTAGAG AATTCATCATAGCCCTGAGTGTAACATCCAGGGGGAAGCTGGAGCAGAAG CTGAAATGGGCCTTCAGCATGTATGACCTGGACGGGAATGGCTACATCAG CAAGGCAGAGATGCTGGAGATCGTGCAGGCAATCTATAAGATGGTTTCCT CCGTGATGAAAATGCCAGAAGATGAATCGACCCCAGAGAAAAGGACAGAA AAGATCTTCCGCCAGATGGATACCAACAGAGACGCTTCTTCTGTCGTGGA CGCTTCGTGGGAATGCCCAGAGCCCCGTGCTTGTGGAGAGCATGGACCAA CTTCGTGGTGT |
| Alignment |
| Align specie | Pep length | Pep align begin | Pep align end | Mutaion type and postion |
| Human | 194 | 1 | 188 | Insert and frame-shift 177-178:C-A^AT |
Instructions:
*** -> premature termination codon; # -> frame shift
Alignment:
Human pep sequence --->
||||||||||||||||||||||
Treeshrew pep sequence --->
Treeshrew cds sequence --->
MetGlyLysGlnAsnSerLysLeuArgProGluValMetGlnAspLeuLeuGluSerThr
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
MetGlyLysGlnAsnSerLysLeuArgProGluValMetGlnAspLeuLeuGluSerThr
ATGGGGAAACAGAACAGCAAGCTGCGCCCAGAGGTCATGCAGGACTTGCTGGAAAGTACA
AspPheThrGluHisGluIleGlnGluTrpTyrLysGlyPheLeuArgAspCysProSer
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
AspPheThrGluHisGluIleGlnGluTrpTyrLysGlyPheLeuArgAspCysProSer
GACTTTACAGAGCATGAGATCCAGGAGTGGTATAAAGGCTTCTTGAGAGACTGCCCCAGT
GlyHisLeuSerMetGluGluPheLysLysIleTyrGlyAsnPhePheProTyrGlyAsp
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GlyHisLeuSerMetGluGluPheLysLysIleTyrGlyAsnPhePheProTyrGlyAsp
GGACATTTGTCAATGGAAGAATTTAAGAAAATATATGGGAACTTTTTCCCTTATGGGGAT
AlaSerLysPheAlaGluHisValPheArgThrPheAspAlaAsnGlyAspGlyThrIle
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
AlaSerLysPheAlaGluHisValPheArgThrPheAspAlaAsnGlyAspGlyThrIle
GCTTCCAAATTCGCAGAGCATGTCTTCCGCACCTTTGATGCAAACGGAGATGGGACAATA
AspPheArgGluPheIleIleAlaLeuSerValThrSerArgGlyLysLeuGluGlnLys
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
AspPheArgGluPheIleIleAlaLeuSerValThrSerArgGlyLysLeuGluGlnLys
GACTTTAGAGAATTCATCATAGCCCTGAGTGTAACATCCAGGGGGAAGCTGGAGCAGAAG
LeuLysTrpAlaPheSerMetTyrAspLeuAspGlyAsnGlyTyrIleSerLysAlaGlu
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
LeuLysTrpAlaPheSerMetTyrAspLeuAspGlyAsnGlyTyrIleSerLysAlaGlu
CTGAAATGGGCCTTCAGCATGTATGACCTGGACGGGAATGGCTACATCAGCAAGGCAGAG
MetLeuGluIleValGln >>>> Target Intron 1 >>>> AlaIleTyrLysM
|||||||||||||||||| 23287 bp |||||||||||||
MetLeuGluIleValGln++ ++AlaIleTyrLysM
ATGCTGGAGATCGTGCAGgt agGCAATCTATAAGA
etValSerSerValMetLysMetProGluAspGluSerThrProGluLysArgThrGluL
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
etValSerSerValMetLysMetProGluAspGluSerThrProGluLysArgThrGluL
TGGTTTCCTCCGTGATGAAAATGCCAGAAGATGAATCGACCCCAGAGAAAAGGACAGAAA
ysIlePheArgGlnMetAspThrAsnArgAsp{A} >>>> Target Intron 2 >>
||||||||||||||||||||||||||||||||{|} 4225 bp
ysIlePheArgGlnMetAspThrAsnArgAsp{A}++
AGATCTTCCGCCAGATGGATACCAACAGAGAC{G}gt
>> {la}SerPheValValAspAlaSerTrpGluCysProGluProGlnCys--AlaCy
{||}||| ||||||||||||||||||||||||||||||||| ##|||||
++{la}SerSerValValAspAlaSerTrpGluCysProGluProArg---##AlaCy
ag{CT}TCTTCTGTCGTGGACGCTTCGTGGGAATGCCCAGAGCCCCGT---ATGCTTG
sGlyGluHisGlyGlnThrSerTrpCys
||||||||||||| ||||||||||||
sGlyGluHisGlyProThrSerTrpCys
TGGAGAGCATGGACCAACTTCGTGGTGT
//
|