| Basic information |
| Official Symbol | HNRNPH2 |
| Description | heterogeneous nuclear ribonucleoprotein H2 (H') |
| Other Aliases | FTP3, HNRPH', HNRPH2, hnRNPH' |
| Other Description | FTP-3; heterogeneous nuclear ribonucleoprotein H-prime; heterogeneous nuclear ribonucleoprotein H2; hnRNP H'; hnRNP H2 |
| Mutation type | Insert and frame-shift 191-192:V-R^GT, premature termination 438:Q->TAG, premature termination 75:R->TGA |
| Location | Scaffold000157_1:750911 749566 - |
| Wiki | Wikipedia GeneCard |
| Sequence |
| HNRNPH2 |
ATGATGCTGAGCACAGGAGGCAGGGAGGGGTTCGTGGTGAAGGTCAGGGG CCTGCCCTGGTCCTGCTCAGCTGATGAAGTGATGTGCTTCTTCTCTGATT GCAAAATCCAGAATGGCACATTGGATATCTGTTTCATCTACACCAGAGAA GGCAGACCAAGTGGTGAAGCATTTGTCAAACTTGAATCTGAAGATGAAGT GAAATTGGCTTTGAAGAAGGACTGAGAAACCATGGGACACAGATATGTTG AAGTATTCAAGTCCAACAGTGTTGAAATGCATTGGGTATTGAAGCATACA GGTCCGAATAGCCCTGATACTGCCAACAATGGCTTCGTCCGGCTTAGAGG ACTCCCATTTGGCTGTAGCAAGGAAGAGATTGTTCAGTTCTTTTCAGGGT TGGAAATTGTGCCAAATGGGATGACACTGCCGGTGGACTTTCAGGGGCGG AGCACAGGGAAGGCCTTTGTGCAGTTTGCTTCACAAGAGATAGCTGAAAA GGCCTTAAAGAAACACAAGGAAAGAATAGGGCACAGGTACATTGAAATCT TCAAGAGTAGCCTAGCTGAACGAACCTATTATGATCCCCCTCGAAAGCTC ATGGCTATGCAGCGCCCGGGTCCCTATGATAGGCCTGGGGCTGGCAGAGG GTATAATAGCATTGGCAGAGGAGTTGGGTTTGAAAGGATGAGGCGGGGTG CCTATGGTGGAGGGTATGGAGGCTATGATGACTATGGTGGCTATAATGAT GGCTATGGCTTTGGGTCTGATAGATTTGGAAGAGACCTCAATTACTGTTT TTCAGGAATGTCTGATCATAGACATGGAGATGGTGGGTCCAGTTTTCAGA GCACCACAGGGCACTGTGTACACATGAGGGGGTTACCGTACAGAGCCACT GAGAATGATATTTACAATTTTTTCTTGCTTCTTAACCCCATGAGAGTACA CATTGAAATTGGACCCGATGGTAGAGTTACTGGTGAAGCAGATGTTGAAT TTGATACTCATGAAGATGCTGTGGCAGCTATGGCAAAAGACAAAGTTAAT ATGCAACACAGATATGTGGAGCTTTTCTTGAATTCTACTGCAGGAACAAG TGGGGGAGCATATGATCATAGCTATGTAGAACTCTACTTGAATTCTACAG CAGGAGCAAGTGGTGGTGCTTATGGTAGCCAGATGATGGGAGGGATGGGC TTATCTAACCAGTCTAGCTATGGAGGTCCTGCTAGCCAGCAGCTGAGTGG TGGTTATGGAGGTGGTTATGGTGGTCAGAGCAGTATAAGTGGACATGACC AAGTTCTGTAGGAAAACTCCAGCGACTATCAGTCAAACCTTGCT |
| Alignment |
| Align specie | Pep length | Pep align begin | Pep align end | Mutaion type and postion |
| Human | 449 | 1 | 449 | Insert and frame-shift 191-192:V-R^GT, Premature termination 438:Q->TAG, Premature termination 75:R->TGA |
Instructions:
*** -> premature termination codon; # -> frame shift
Alignment:
Human pep sequence --->
||||||||||||||||||||||
Treeshrew pep sequence --->
Treeshrew cds sequence --->
MetMetLeuSerThrGluGlyArgGluGlyPheValValLysValArgGlyLeuProTrpSe
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
MetMetLeuSerThrGlyGlyArgGluGlyPheValValLysValArgGlyLeuProTrpSe
ATGATGCTGAGCACAGGAGGCAGGGAGGGGTTCGTGGTGAAGGTCAGGGGCCTGCCCTGGTC
rCysSerAlaAspGluValMetArgPhePheSerAspCysLysIleGlnAsnGlyThrSerG
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||
rCysSerAlaAspGluValMetCysPhePheSerAspCysLysIleGlnAsnGlyThrLeuA
CTGCTCAGCTGATGAAGTGATGTGCTTCTTCTCTGATTGCAAAATCCAGAATGGCACATTGG
lyIleArgPheIleTyrThrArgGluGlyArgProSerGlyGluAlaPheValGluLeuGlu
||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||
spIleCysPheIleTyrThrArgGluGlyArgProSerGlyGluAlaPheValLysLeuGlu
ATATCTGTTTCATCTACACCAGAGAAGGCAGACCAAGTGGTGAAGCATTTGTCAAACTTGAA
SerGluGluGluValLysLeuAlaLeuLysLysAspArgGluThrMetGlyHisArgTyrVa
|||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||
SerGluAspGluValLysLeuAlaLeuLysLysAsp***GluThrMetGlyHisArgTyrVa
TCTGAAGATGAAGTGAAATTGGCTTTGAAGAAGGACTGAGAAACCATGGGACACAGATATGT
lGluValPheLysSerAsnSerValGluMetAspTrpValLeuLysHisThrGlyProAsnS
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
lGluValPheLysSerAsnSerValGluMetHisTrpValLeuLysHisThrGlyProAsnS
TGAAGTATTCAAGTCCAACAGTGTTGAAATGCATTGGGTATTGAAGCATACAGGTCCGAATA
erProAspThrAlaAsnAspGlyPheValArgLeuArgGlyLeuProPheGlyCysSerLys
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
erProAspThrAlaAsnAsnGlyPheValArgLeuArgGlyLeuProPheGlyCysSerLys
GCCCTGATACTGCCAACAATGGCTTCGTCCGGCTTAGAGGACTCCCATTTGGCTGTAGCAAG
GluGluIleValGlnPhePheSerGlyLeuGluIleValProAsnGlyMetThrLeuProVa
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GluGluIleValGlnPhePheSerGlyLeuGluIleValProAsnGlyMetThrLeuProVa
GAAGAGATTGTTCAGTTCTTTTCAGGGTTGGAAATTGTGCCAAATGGGATGACACTGCCGGT
lAspPheGlnGlyArgSerThrGlyGluAlaPheValGlnPheAlaSerGlnGluIleAlaG
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
lAspPheGlnGlyArgSerThrGlyLysAlaPheValGlnPheAlaSerGlnGluIleAlaG
GGACTTTCAGGGGCGGAGCACAGGGAAGGCCTTTGTGCAGTTTGCTTCACAAGAGATAGCTG
luLysAlaLeuLysLysHisLysGluArgIleGlyHisArgTyrIleGluIlePheLysSer
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
luLysAlaLeuLysLysHisLysGluArgIleGlyHisArgTyrIleGluIlePheLysSer
AAAAGGCCTTAAAGAAACACAAGGAAAGAATAGGGCACAGGTACATTGAAATCTTCAAGAGT
SerArgAlaGluVal--ArgThrHisTyrAspProProArgLysLeuMetAlaMetGlnArg
||| |||||| ##|||||| ||||||||||||||||||||||||||||||||||||
SerLeuAlaGlu---##ArgThrTyrTyrAspProProArgLysLeuMetAlaMetGlnArg
AGCCTAGCTGAA---GTCGAACCTATTATGATCCCCCTCGAAAGCTCATGGCTATGCAGCGC
ProGlyProTyrAspArgProGlyAlaGlyArgGlyTyrAsnSerIleGlyArgGlyAlaGl
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
ProGlyProTyrAspArgProGlyAlaGlyArgGlyTyrAsnSerIleGlyArgGlyValGl
CCGGGTCCCTATGATAGGCCTGGGGCTGGCAGAGGGTATAATAGCATTGGCAGAGGAGTTGG
yPheGluArgMetArgArgGlyAlaTyrGlyGlyGlyTyrGlyGlyTyrAspAspTyrGlyG
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
yPheGluArgMetArgArgGlyAlaTyrGlyGlyGlyTyrGlyGlyTyrAspAspTyrGlyG
GTTTGAAAGGATGAGGCGGGGTGCCTATGGTGGAGGGTATGGAGGCTATGATGACTATGGTG
lyTyrAsnAspGlyTyrGlyPheGlySerAspArgPheGlyArgAspLeuAsnTyrCysPhe
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
lyTyrAsnAspGlyTyrGlyPheGlySerAspArgPheGlyArgAspLeuAsnTyrCysPhe
GCTATAATGATGGCTATGGCTTTGGGTCTGATAGATTTGGAAGAGACCTCAATTACTGTTTT
SerGlyMetSerAspHisArgTyrGlyAspGlyGlySerSerPheGlnSerThrThrGlyHi
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
SerGlyMetSerAspHisArgHisGlyAspGlyGlySerSerPheGlnSerThrThrGlyHi
TCAGGAATGTCTGATCATAGACATGGAGATGGTGGGTCCAGTTTTCAGAGCACCACAGGGCA
sCysValHisMetArgGlyLeuProTyrArgAlaThrGluAsnAspIleTyrAsnPhePheS
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
sCysValHisMetArgGlyLeuProTyrArgAlaThrGluAsnAspIleTyrAsnPhePheL
CTGTGTACACATGAGGGGGTTACCGTACAGAGCCACTGAGAATGATATTTACAATTTTTTCT
erProLeuAsnProMetArgValHisIleGluIleGlyProAspGlyArgValThrGlyGlu
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
euLeuLeuAsnProMetArgValHisIleGluIleGlyProAspGlyArgValThrGlyGlu
TGCTTCTTAACCCCATGAGAGTACACATTGAAATTGGACCCGATGGTAGAGTTACTGGTGAA
AlaAspValGluPheAlaThrHisGluAspAlaValAlaAlaMetAlaLysAspLysAlaAs
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
AlaAspValGluPheAspThrHisGluAspAlaValAlaAlaMetAlaLysAspLysValAs
GCAGATGTTGAATTTGATACTCATGAAGATGCTGTGGCAGCTATGGCAAAAGACAAAGTTAA
nMetGlnHisArgTyrValGluLeuPheLeuAsnSerThrAlaGlyThrSerGlyGlyAlaT
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
nMetGlnHisArgTyrValGluLeuPheLeuAsnSerThrAlaGlyThrSerGlyGlyAlaT
TATGCAACACAGATATGTGGAGCTTTTCTTGAATTCTACTGCAGGAACAAGTGGGGGAGCAT
yrAspHisSerTyrValGluLeuPheLeuAsnSerThrAlaGlyAlaSerGlyGlyAlaTyr
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
yrAspHisSerTyrValGluLeuTyrLeuAsnSerThrAlaGlyAlaSerGlyGlyAlaTyr
ATGATCATAGCTATGTAGAACTCTACTTGAATTCTACAGCAGGAGCAAGTGGTGGTGCTTAT
GlySerGlnMetMetGlyGlyMetGlyLeuSerAsnGlnSerSerTyrGlyGlyProAlaSe
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GlySerGlnMetMetGlyGlyMetGlyLeuSerAsnGlnSerSerTyrGlyGlyProAlaSe
GGTAGCCAGATGATGGGAGGGATGGGCTTATCTAACCAGTCTAGCTATGGAGGTCCTGCTAG
rGlnGlnLeuSerGlyGlyTyrGlyGlyGlyTyrGlyGlyGlnSerSerMetSerGlyTyrA
||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
rGlnGlnLeuSerGlyGlyTyrGlyGlyGlyTyrGlyGlyGlnSerSerIleSerGlyHisA
CCAGCAGCTGAGTGGTGGTTATGGAGGTGGTTATGGTGGTCAGAGCAGTATAAGTGGACATG
spGlnValLeuGlnGluAsnSerSerAspTyrGlnSerAsnLeuAla
||||||||||| |||||||||||||||||||||||||||||||||
spGlnValLeu***GluAsnSerSerAspTyrGlnSerAsnLeuAla
ACCAAGTTCTGTAGGAAAACTCCAGCGACTATCAGTCAAACCTTGCT
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