| Basic information |
| Official Symbol | C2orf73 |
| Description | chromosome 2 open reading frame 73 |
| Other Aliases | NA |
| Other Description | uncharacterized protein C2orf73 |
| Mutation type | premature termination 225:Q->TGA |
| Location | Scaffold000622_1:5957529 5985711 + |
| Wiki | Wikipedia GeneCard |
| Sequence |
| C2orf73 |
AGACAGCATAAAGTAGAAGATGCTGCTATAGTGTGTGTAACTGAAAAAAA AGAAGAAATCAAACATGAAAAAAAACCTGGACAAAGCTTACAACCTTCAA AGCCATGTGTTGGGAGAGGACGTGTATTTTATGCTAAATTCATTAACACT AATGCAAGAACATACAATGAACCAATTCCCTACATAGATCCCAAAAAAGG GCCATCAAAGCAGGGTGACTGGTGGCCACACAGTAGAGTACTGGAATATG CCTTTCAACCACCTTATGACACTAAGAGCACCCAGAGGAGTGATTTCCAA AAACCAACGTGTCCATTGGTTTCACCAGTTAAACATAGCAGGATGCAAAA ACCTTCTTGTGGAATAGTTCCACTTGTCTCTCCTGATGCAGCAGCAGAAC TTCAGAACAATTTTATAGAACGCATTTCTTTTACACATCAATATGATGCC AGGAAAACACCTAATGAGCCCGTCCGGGGGAAGAGACATGGAACTTTTGT GCAGAGAGAGAGAAAGCCAGGGAGCAGGCCAATAGTTCCTAAGGGAACAG AAGTATTACTGAACGCTCCAGGGTCATGTTCATCAGAACAGTCCAAGAAA ACAGAGAAAGGAAATTCCGTGGAAAGCAGAATGATCTCACCAGGTCTCTG CTGACAAAACCCCCCAGAGCTGTTAGAGACTAAAATGCATGTATCAGAAG AAGACCTCAGAGAGGCCACGGGGGCAATTCCTGAGAGGAGGGAGAAGACT ATGGGCAGCTTTCAGGTGACTGTA |
| Alignment |
| Align specie | Pep length | Pep align begin | Pep align end | Mutaion type and postion |
| Human | 287 | 9 | 268 | Premature termination 225:Q->TGA |
Instructions:
*** -> premature termination codon; # -> frame shift
Alignment:
Human pep sequence --->
||||||||||||||||||||||
Treeshrew pep sequence --->
Treeshrew cds sequence --->
GlnGlnHisLysIleGluAspAlaAlaIleThrTyrValSerGlu<->AsnGluGluIle
||||||||| ||||||||||||||| ||| ||| |||||||||
ArgGlnHisLysValGluAspAlaAlaIleValCysValThrGluLysLysGluGluIle
AGACAGCATAAAGTAGAAGATGCTGCTATAGTGTGTGTAACTGAAAAAAAAGAAGAAATC
LysHisGluGluLysProGlyLysSerIleHisHisSerLysSerHisValGlyArgGly
||||||||| ||||||||| ||| |||||| ||||||||||||
LysHisGluLysLysProGlyGlnSerLeuGlnProSerLysProCysValGlyArgGly
AAACATGAAAAAAAACCTGGACAAAGCTTACAACCTTCAAAGCCATGTGTTGGGAGAGGA
ArgIleTyrTyrAlaLysPheIleAsnThrAsnAlaArgThrTyrAsnGluProPhePro
||| ||||||||||||||||||||||||||||||||||||||||||||| |||
ArgValPheTyrAlaLysPheIleAsnThrAsnAlaArgThrTyrAsnGluProIlePro
CGTGTATTTTATGCTAAATTCATTAACACTAATGCAAGAACATACAATGAACCAATTCCC
TyrIleAspProLysLysGlyProGluIleGln >>>> Target Intron 1 >>>>
|||||||||||||||||||||||| ||| 8541 bp
TyrIleAspProLysLysGlyProSerLysGln++
TACATAGATCCCAAAAAAGGGCCATCAAAGCAGgt
GlyAspTrpTrpSerHisGlyLysAlaLeuGluProValPheLeuProProTyrAspS
|||||||||||| ||| |||||| ||| ||||||||||||
++GlyAspTrpTrpProHisSerArgValLeuGluTyrAlaPheGlnProProTyrAspT
agGGTGACTGGTGGCCACACAGTAGAGTACTGGAATATGCCTTTCAACCACCTTATGACA
erLysSerThrGlnArgSerAspPheGlnLysProSerCysProLeuValLeuProValL
||||||||||||||||||||||||||||||||| |||||||||||| |||||||
hrLysSerThrGlnArgSerAspPheGlnLysProThrCysProLeuValSerProValL
CTAAGAGCACCCAGAGGAGTGATTTCCAAAAACCAACGTGTCCATTGGTTTCACCAGTTA
ysHisSerLysMetGlnLysProSerCysGlyIle{V} >>>> Target Intron 2
|||||||| ||||||||||||||||||||||||{|} 17497 bp
ysHisSerArgMetGlnLysProSerCysGlyIle{V}++
AACATAGCAGGATGCAAAAACCTTCTTGTGGAATA{G}gt
>>>> {al}ProLeuAlaSerProGlyThrSerAlaGluLeuGlnAsnAsnPheIleG
{||}|||||| |||||| |||||||||||||||||||||||||
++{al}ProLeuValSerProAspAlaAlaAlaGluLeuGlnAsnAsnPheIleG
ag{TT}CCACTTGTCTCTCCTGATGCAGCAGCAGAACTTCAGAACAATTTTATAG
luTyrIleSerPheIleHisGlnTyrAspAlaArgLysThrProAsnGluProLeuGlnG
|| ||||||||| |||||||||||||||||||||||||||||||||||| |
luArgIleSerPheThrHisGlnTyrAspAlaArgLysThrProAsnGluProValArgG
AACGCATTTCTTTTACACATCAATATGATGCCAGGAAAACACCTAATGAGCCCGTCCGGG
lyLys >>>> Target Intron 3 >>>> ArgHisGlyAlaPheValGlnArgGl
||||| 1371 bp ||||||||| ||||||||||||||
lyLys++ ++ArgHisGlyThrPheValGlnArgGl
GGAAGgt agAGACATGGAACTTTTGTGCAGAGAGA
uIleLysProGlySerArgProThrValProLysGlyAlaGluValLeuLeuAsnThrPr
| |||||||||||||||||| |||||||||||| ||||||||||||||| ||
uArgLysProGlySerArgProIleValProLysGlyThrGluValLeuLeuAsnAlaPr
GAGAAAGCCAGGGAGCAGGCCAATAGTTCCTAAGGGAACAGAAGTATTACTGAACGCTCC
oGlySerArgSerSerGluGlnSerLysLysThrGluLysGlyAsnSerAlaGluSerAr
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
oGlySerCysSerSerGluGlnSerLysLysThrGluLysGlyAsnSerValGluSerAr
AGGGTCATGTTCATCAGAACAGTCCAAGAAAACAGAGAAAGGAAATTCCGTGGAAAGCAG
gMetIleSerProGlyLeuCysGlnGlnAsnSerGlnGluLeuLeuGluProLysThrHi
|||||||||||||||||||||| |||||| |||||||||||| ||| ||
gMetIleSerProGlyLeuCys***GlnAsnProProGluLeuLeuGluThrLysMetHi
AATGATCTCACCAGGTCTCTGCTGACAAAACCCCCCAGAGCTGTTAGAGACTAAAATGCA
sLeuSerGluThrAspValArgGlnAlaAlaLysAlaCysProSerThrProGluSerAr
| |||||| ||| ||| ||| ||| |||||| ||
sValSerGluGluAspLeuArgGluAlaThrGlyAla---------IleProGluArgAr
TGTATCAGAAGAAGACCTCAGAGAGGCCACGGGGGCA---------ATTCCTGAGAGGAG
gGluLysThrSerGlyAlaThrGlnThrThrVal
|||||||||| ||| ||| ||||||
gGluLysThrMetGlySerPheGlnValThrVal
GGAGAAGACTATGGGCAGCTTTCAGGTGACTGTA
//
|