| Basic information |
| Official Symbol | C18orf26 |
| Description | NA |
| Other Aliases | NA |
| Other Description | NA |
| Mutation type | premature termination 18:E->TAA |
| Location | Scaffold000098_2:1291558 1277384 - |
| Wiki | Wikipedia GeneCard |
| Sequence |
| C18orf26 |
AAAGGGCATGGACAAACTGAAAAATATTCTTGGAGTTAAGCTTGTGATAC TGGCAGCTCAAGAATGGACAGAAAGCATGGAAAATACGTAGTAAATGTTG AACCATCTGGAAACCAGCCACCAATCCCATGTCCTAGTGACCAAGAAGCT CACAGCTCCACACGTTGGTGTCCACCTTCAGATGACATAACTGGGGATGT ATCCTCCAACTTAACTGGGGTCTGGGTGAACCCAGGAATTCTTGCACACT CGAGATGTCCACAACCAGAATTATGCAACACACAGGTAAAAAGAAATTGC TGCAATGACTGGTCTCTGTGGAAAGTATTCCTGGCTTGTCTGTTAGCTTG TGTGATAACAACAGCGATAGGAGTACTCATAATATGCCTCGTAAATAATA CGGGAAATGGCAGCTCCTCCGTTGTTATCCAACTCCCCACAAACAATGGA GAGCCTGTAGTTGTTGTACCTGGAACAACTTCTACTACTTCTCAAACTAC TGTGACCACCACCTCAACCACAGCTGCCACTGCTTCAACAGAATCTACAA CCACCACAGCTACCACCACCACTTCAAGTGAAACCACAGCTGCCACTGCT TCAACAGAA |
| Alignment |
| Align specie | Pep length | Pep align begin | Pep align end | Mutaion type and postion |
| Human | 210 | 6 | 208 | Premature termination 18:E->TAA |
Instructions:
*** -> premature termination codon; # -> frame shift
Alignment:
Human pep sequence --->
||||||||||||||||||||||
Treeshrew pep sequence --->
Treeshrew cds sequence --->
LysGlyAsnGluGlnIleGluLysTyrSerTrpArgGluAlaCysAspThrGlySerSer
|||||| ||| ||||||||||||||| |||||||||||||||||||||
LysGlyHisGlyGlnThrGluLysTyrSerTrpSer***AlaCysAspThrGlySerSer
AAAGGGCATGGACAAACTGAAAAATATTCTTGGAGTTAAGCTTGTGATACTGGCAGCTCA
ArgMetAspArgLysHisGlyLysTyrIleLeuAsnValGluHisSerGluAsnGlnPro
||||||||||||||||||||||||||| ||||||||| ||| |||||||||
ArgMetAspArgLysHisGlyLysTyrValValAsnValGluProSerGlyAsnGlnPro
AGAATGGACAGAAAGCATGGAAAATACGTAGTAAATGTTGAACCATCTGGAAACCAGCCA
>>>> Target Intron 1 >>>> ProIleThrHisProAsnAspGlnGluAlaH
4176 bp |||||| ||| |||||||||||||
++ ++ProIleProCysProSerAspGlnGluAlaH
gt agCCAATCCCATGTCCTAGTGACCAAGAAGCTC
isSerSerIleCysTrpCysLeuProSerAsnAspIleThrSerAspValSerProAsnL
|||||||| |||||| |||||| ||||||||| ||||||||| ||||
isSerSerThrArgTrpCysProProSerAspAspIleThrGlyAspValSerSerAsnL
ACAGCTCCACACGTTGGTGTCCACCTTCAGATGACATAACTGGGGATGTATCCTCCAACT
euThrGlyValCysValAsnProGlyIleLeuAlaHisSerArgCysLeuGlnSerGluS
||||||||||| ||||||||||||||||||||||||||||||||| ||| |||
euThrGlyValTrpValAsnProGlyIleLeuAlaHisSerArgCysProGlnProGluL
TAACTGGGGTCTGGGTGAACCCAGGAATTCTTGCACACTCGAGATGTCCACAACCAGAAT
erCysAsnThrGln >>>> Target Intron 2 >>>> ValLysGluTyrCysAr
|||||||||||| 9161 bp |||||| |||
euCysAsnThrGln++ ++ValLysArgAsnCysCy
TATGCAACACACAGgt agGTAAAAAGAAATTGCTG
gAsnAspTrpSerMetTrpLysValPheLeuAlaCysLeuLeuAlaCysValIleMetTh
|||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
sAsnAspTrpSerLeuTrpLysValPheLeuAlaCysLeuLeuAlaCysValIleThrTh
CAATGACTGGTCTCTGTGGAAAGTATTCCTGGCTTGTCTGTTAGCTTGTGTGATAACAAC
rAlaIleGlyValLeuIleIleCysLeuValAsnAsnLysGlySerAlaAsnSerSerIl
||||||||||||||||||||||||||||||||||||| ||| ||||||
rAlaIleGlyValLeuIleIleCysLeuValAsnAsnThrGlyAsnGlySerSerSerVa
AGCGATAGGAGTACTCATAATATGCCTCGTAAATAATACGGGAAATGGCAGCTCCTCCGT
eValIleGlnLeuSerThrAsnAspGlyGluCysValThrValLysProGlyThrProSe
|||||||||||| |||||| |||||| ||| ||| ||||||||| ||
lValIleGlnLeuProThrAsnAsnGlyGluProValValValValProGlyThrThrSe
TGTTATCCAACTCCCCACAAACAATGGAGAGCCTGTAGTTGTTGTACCTGGAACAACTTC
rProAlaCysProProThrMetThrThrThrSer{T} >>>> Target Intron 3
| ||| ||||||||||||{|} 229 bp
rThrThrSerGlnThrThrValThrThrThrSer{T}++
TACTACTTCTCAAACTACTGTGACCACCACCTCA{A}gt
>>>> {hr}ValProAlaSerThrAlaThrGluSerThrThrSerThrAlaThrAlaAl
{||} ||| ||||||||||||||| |||||||||
+-{hr}ThrAlaAlaThrAlaSerThrGluSerThrThrThrThrAlaThrThrTh
aa{CC}ACAGCTGCCACTGCTTCAACAGAATCTACAACCACCACAGCTACCACCAC
aThrThrSerThrGluProIleThrValAlaProThrAsp
||| ||| ||| |||
rThrSerSerGluThrThrAlaAlaThrAlaSerThrGlu
CACTTCAAGTGAAACCACAGCTGCCACTGCTTCAACAGAA
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