| Basic information |
| Official Symbol | ACCS |
| Description | 1-aminocyclopropane-1-carboxylate synthase homolog (Arabidopsis)(non-functional) |
| Other Aliases | ACS, PHACS |
| Other Description | 1-aminocyclopropane-1-carboxylate synthase-like protein 1; ACC synthase-like protein 1 |
| Mutation type | Insert and frame-shift 489-490:R-P^T, premature termination 279:H->TGA |
| Location | Scaffold000561_1:17542 34395 + |
| Wiki | Wikipedia GeneCard |
| Sequence |
| ACCS |
AAGCTTTACCAAGTGGGCGATCCCACTGCCACGTTCTCCTGTGACAGCTC CTGCCTGTCCTCTAGAGGGAAAATCGTTAAATGGTTCTGGGACTCAGCTG AGAAGGGCTACAGGACCTACCATGAGAACGAATATGATGAGGACAAGAAC CCCAGTGGCATCATTAACTTGGGCACCAGTGAGAACAAGCTCTGCTTCGA CCTGCTGTCCTGGCGGCTGAGACAGAGCGACATGCTTCAGGTGGAGCCAT CCCTGCTGCAGTACGGTGACTGGAGGGGACATCTGTTCCTCCGGGAGGAA GTGGCCAAGTTCTTATCTTTCTACTGCAAGAGCCCAGCACCCCTCAAACC AGAAAATGTGGTGGTTCTGAACGGCTGTGCCTCGCTCTTCTCTGCTCTGG CCACGGTGCTGTGTGAGGTGGGGGAGGCTTTCCTGATCCCCACCCCTTAC TACGGAGCCATCACCCAGCACGTCTTCCTCTACGGCAGCGTCCGCCTGGT CTACGTCCATCTGGACAGCGAGGTCACTGGGCAAGACACGCGCCCCTTCC AGCTGACAGTGGAGAAGCTCGAGATGGCCCTGCGAGGAGCGAATTCTGAG GGTGTGAAGGTCAAAGGCCTCATCCTCATCAACCCCCAGAACCCCCTGGG TGACATCTACTCCCCGGGAGAGCTGCAGGAATACCTGGAATTTGCCAAGA GGTGAAGCAGCAGGGTTTGCCACCACAGGCATGGTCACCCTAGGCCAGAC CAACGTCCCTCTGCGTACTGCAGTGTCCTAGGCCTGGAAAGGCTGCCTGA TCCCCAGAGGACCCACGTGATGTGGGCGACCAGCAAGGACTTCGGGATGT CTGGGCTCCGCTTTGGCACGCTGTACACAGAGAACCAGGATGTGGCCACT GCTGTGGCTTCCCTCTGCCGCTATCATGGCCTCAGTGGCTTGCTCCAGAG CCAGATGGCCCAGATGCTCCGTGACCGAGACTGGATCAACCAGGTGTACC TGCCGGAAAACCACGCCCGACTCAAGGCTGCCCATGCCTATGTCTCAGAA GAGCTCAGAGCCCTGGGGGTCCCCTTCCTGAGTCGGGGGGCAGGCTTCTT CATCTGGGTTGACTTGAGAAAGTTCCTGCCCAAGGGCACCTTTGAGGAGG AAATGCAGCTCTGGTACCGCTTTTTGGAGAACAAGGTGCTGCTGTCCTAT GGCAAGGCCTTCCAGTGCAGGGAGCCCGGCTGGTTCCGCATCATCTTCTC AGACAGGGCCCACCGGCTCCGCTTGGGGATGCAAAGGGTCCGGCAGGTGC TGGAGGGCAAGTCCCAAGTGGTAGAAGAACCTGCCCCCTGGCAGACCCAG GAGCCAAGTGATCAGCCCAGG |
| Alignment |
| Align specie | Pep length | Pep align begin | Pep align end | Mutaion type and postion |
| Human | 501 | 46 | 501 | Insert and frame-shift 489-490:R-P^T, Premature termination 279:H->TGA |
Instructions:
*** -> premature termination codon; # -> frame shift
Alignment:
Human pep sequence --->
||||||||||||||||||||||
Treeshrew pep sequence --->
Treeshrew cds sequence --->
GluLeuArgGlyValGlyAspPro<->AlaMetIleSerSerAspThrSerTyrLeuSer
||| |||||||||||| ||| ||| ||| ||| ||||||
LysLeuTyrGlnValGlyAspProThrAlaThrPheSerCysAspSerSerCysLeuSer
AAGCTTTACCAAGTGGGCGATCCCACTGCCACGTTCTCCTGTGACAGCTCCTGCCTGTCC
SerArgGlyArgMetIleLysTrpPheTrpAspSerAlaGluGluGlyTyrArgThrTyr
||||||||| |||||||||||||||||||||||| |||||||||||||||
SerArgGlyLysIleValLysTrpPheTrpAspSerAlaGluLysGlyTyrArgThrTyr
TCTAGAGGGAAAATCGTTAAATGGTTCTGGGACTCAGCTGAGAAGGGCTACAGGACCTAC
HisMetAspGluTyrAspGluAspLysAsnProSer >>>> Target Intron 1 >
||| ||||||||||||||||||||||||||| 2370 bp
HisGluAsnGluTyrAspGluAspLysAsnProSer++
CATGAGAACGAATATGATGAGGACAAGAACCCCAGTgt
>>> GlyIleIleAsnLeuGlyThrSerGluAsnLysLeuCysPheAspLeuLeuSerT
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
++GlyIleIleAsnLeuGlyThrSerGluAsnLysLeuCysPheAspLeuLeuSerT
agGGCATCATTAACTTGGGCACCAGTGAGAACAAGCTCTGCTTCGACCTGCTGTCCT
rpArg >>>> Target Intron 2 >>>> LeuSerGlnArgAspMetGlnArgVa
||||| 2921 bp ||| ||| |||||| ||
rpArg++ ++LeuArgGlnSerAspMetLeuGlnVa
GGCGGgt agCTGAGACAGAGCGACATGCTTCAGGT
lGluProSerLeuLeuGlnTyrAlaAspTrpArgGlyHisLeu{Ph} >>>> Target
|||||||||||||||||||||| ||||||||||||||||||{||} 15
lGluProSerLeuLeuGlnTyrGlyAspTrpArgGlyHisLeu{Ph}++
GGAGCCATCCCTGCTGCAGTACGGTGACTGGAGGGGACATCTG{TT}gt
Intron 3 >>>> {e}LeuArgGluGluValAlaLysPheLeuSerPheTyrCysLy
97 bp {|}|||||||||||||||||||||||||||||||||||||||||
++{e}LeuArgGluGluValAlaLysPheLeuSerPheTyrCysLy
ag{C}CTCCGGGAGGAAGTGGCCAAGTTCTTATCTTTCTACTGCAA
sSerProValProLeuArgProGluAsn >>>> Target Intron 4 >>>> Val
||||||| |||||| ||||||||| 508 bp |||
sSerProAlaProLeuLysProGluAsn++ ++Val
GAGCCCAGCACCCCTCAAACCAGAAAATgt agGTG
ValValLeuAsnGlyGlyAlaSerLeuPheSerAlaLeuAlaThrValLeuCysGluAla
||||||||||||||| |||||||||||||||||||||||||||||||||||||||
ValValLeuAsnGlyCysAlaSerLeuPheSerAlaLeuAlaThrValLeuCysGluVal
GTGGTTCTGAACGGCTGTGCCTCGCTCTTCTCTGCTCTGGCCACGGTGCTGTGTGAGGTG
Gly{G} >>>> Target Intron 5 >>>> {lu}AlaPheLeuIleProThrPro
|||{|} 1652 bp {||}|||||||||||||||||||||
Gly{G}++ ++{lu}AlaPheLeuIleProThrPro
GGG{G}gt ag{AG}GCTTTCCTGATCCCCACCCCT
TyrTyrGlyAlaIleThrGlnHisValCysLeuTyrGlyAsnIleArgLeuAlaTyrVal
||||||||||||||||||||||||||| ||||||||| |||||| ||||||
TyrTyrGlyAlaIleThrGlnHisValPheLeuTyrGlySerValArgLeuValTyrVal
TACTACGGAGCCATCACCCAGCACGTCTTCCTCTACGGCAGCGTCCGCCTGGTCTACGTC
TyrLeuAspSerGlu >>>> Target Intron 6 >>>> ValThrGlyLeuAspT
|||||||||||| 472 bp ||||||||| ||||
HisLeuAspSerGlu++ ++ValThrGlyGlnAspT
CATCTGGACAGCGAGgt agGTCACTGGGCAAGACA
hrArgProPheGlnLeuThrValGluLysLeuGluMetAlaLeuArgGluAlaHisSerG
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
hrArgProPheGlnLeuThrValGluLysLeuGluMetAlaLeuArgGlyAlaAsnSerG
CGCGCCCCTTCCAGCTGACAGTGGAGAAGCTCGAGATGGCCCTGCGAGGAGCGAATTCTG
lu >>>> Target Intron 7 >>>> GlyValLysValLysGlyLeuIleLeuIl
|| 756 bp |||||||||||||||||||||||||||||
lu++ ++GlyValLysValLysGlyLeuIleLeuIl
AGgt agGGTGTGAAGGTCAAAGGCCTCATCCTCAT
eSerProGlnAsnProLeuGlyAspValTyrSerProGluGluLeuGlnGluTyrLeuVa
| ||||||||||||||||||||| ||||||||| ||||||||||||||||||
eAsnProGlnAsnProLeuGlyAspIleTyrSerProGlyGluLeuGlnGluTyrLeuGl
CAACCCCCAGAACCCCCTGGGTGACATCTACTCCCCGGGAGAGCTGCAGGAATACCTGGA
lPheAlaLysArgHisArgLeuHisValIle{V} >>>> Target Intron 8 >>>
|||||||||||| ||| { } 407 bp
uPheAlaLysArg***SerSerArgValCys{H}++
ATTTGCCAAGAGGTGAAGCAGCAGGGTTTGC{C}gt
> {al}AspGluValTyrMetLeuSerValPheGluLysSerValGlyTyrArgSerVa
{ } ||| |||||
-+{is}HisArgHisGlyHisProArgProAspGlnArgProSerAlaTyrCysSerVa
tg{AC}CACAGGCATGGTCACCCTAGGCCAGACCAACGTCCCTCTGCGTACTGCAGTGT
lLeuSerLeuGlu{Ar} >>>> Target Intron 9 >>>> {g}LeuProAspPr
|||| ||||||{||} 1465 bp {|}|||||||||||
lLeuGlyLeuGlu{Ar}++ ++{g}LeuProAspPr
CCTAGGCCTGGAA{AG}gt ag{G}CTGCCTGATCC
oGlnArgThrHisValMetTrpAlaThrSerLys >>>> Target Intron 10 >>
|||||||||||||||||||||||||||||||||| 106 bp
oGlnArgThrHisValMetTrpAlaThrSerLys++
CCAGAGGACCCACGTGATGTGGGCGACCAGCAAGgt
>> AspPheGlyMetSerGlyLeuArgPheGlyThrLeuTyrThrGluAsnGlnAspVa
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
++AspPheGlyMetSerGlyLeuArgPheGlyThrLeuTyrThrGluAsnGlnAspVa
agGACTTCGGGATGTCTGGGCTCCGCTTTGGCACGCTGTACACAGAGAACCAGGATGT
lAlaThrAlaValAlaSerLeuCysArgTyrHisGlyLeuSerGlyLeuValGlnTyrGl
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
lAlaThrAlaValAlaSerLeuCysArgTyrHisGlyLeuSerGlyLeuLeuGlnSerGl
GGCCACTGCTGTGGCTTCCCTCTGCCGCTATCATGGCCTCAGTGGCTTGCTCCAGAGCCA
nMetAlaGlnLeuLeuArgAspArg{A} >>>> Target Intron 11 >>>> {s
|||||||||| ||||||||||||{|} 2802 bp {|
nMetAlaGlnMetLeuArgAspArg{A}++ ++{s
GATGGCCCAGATGCTCCGTGACCGA{G}gt ag{A
p}TrpIleAsnGlnValTyrLeuProGluAsnHisAlaArgLeuLysAlaAlaHisThrT
|}|||||||||||||||||||||||||||||||||||||||||||||||||||||| |
p}TrpIleAsnGlnValTyrLeuProGluAsnHisAlaArgLeuLysAlaAlaHisAlaT
C}TGGATCAACCAGGTGTACCTGCCGGAAAACCACGCCCGACTCAAGGCTGCCCATGCCT
yrValSerGluGluLeuArgAlaLeuGlyIleProPheLeuSerArgGlyAlaGlyPheP
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
yrValSerGluGluLeuArgAlaLeuGlyValProPheLeuSerArgGlyAlaGlyPheP
ATGTCTCAGAAGAGCTCAGAGCCCTGGGGGTCCCCTTCCTGAGTCGGGGGGCAGGCTTCT
heIleTrpValAspLeuArgLys >>>> Target Intron 12 >>>> TyrLeuP
||||||||||||||||||||||| 119 bp ||||
heIleTrpValAspLeuArgLys++ ++PheLeuP
TCATCTGGGTTGACTTGAGAAAGgt agTTCCTGC
roLysGlyThrPheGluGluGluMetLeuLeuTrpArgArgPheLeuAspAsnLysValL
|||||||||||||||||||||||||| |||||| ||||||||| ||||||||||
roLysGlyThrPheGluGluGluMetGlnLeuTrpTyrArgPheLeuGluAsnLysValL
CCAAGGGCACCTTTGAGGAGGAAATGCAGCTCTGGTACCGCTTTTTGGAGAACAAGGTGC
euLeuSerPheGlyLysAlaPheGluCysLysGluProGlyTrpPheArgPheValPheS
|||||||| |||||||||||| ||| |||||||||||||||||| ||||
euLeuSerTyrGlyLysAlaPheGlnCysArgGluProGlyTrpPheArgIleIlePheS
TGCTGTCCTATGGCAAGGCCTTCCAGTGCAGGGAGCCCGGCTGGTTCCGCATCATCTTCT
erAspGlnValHisArgLeuCysLeu{G} >>>> Target Intron 13 >>>> {
||||| ||||||||| |||{|} 307 bp {
erAspArgAlaHisArgLeuArgLeu{G}++ ++{
CAGACAGGGCCCACCGGCTCCGCTTG{G}gt ag{
ly}MetGlnArgValGlnGlnValLeuAlaGlyLysSerGlnValAlaGluAspProArg
||}|||||||||||| ||||||||| ||||||||||||||| ||| |||
ly}MetGlnArgValArgGlnValLeuGluGlyLysSerGlnValValGluGluProAla
GG}ATGCAAAGGGTCCGGCAGGTGCTGGAGGGCAAGTCCCAAGTGGTAGAAGAACCTGCC
-ProSerGlnSerGlnGluProSerAspGlnArgArg
#||| ||| |||||||||||||||||| |||
#ProTrpGlnThrGlnGluProSerAspGlnProArg
TCCCTGGCAGACCCAGGAGCCAAGTGATCAGCCCAGG
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